Installation¶
On this page, you will find out how to install ZARP on your system.
Requirements¶
Installation requires the following:
- Linux (tested with Ubuntu 20.04; macOS has not been tested yet)
- Conda (tested with
conda 22.11.1
) - Mamba (tested with
mamba 1.3.0
) - Singularity (tested with
singularity 3.8.6
; not required if you have root permissions on the machine you would like to install ZARP on; in that case, see below)
Other versions, especially older ones, are not guaranteed to work.
TODO: Add/replace requirements/versions and check that everything is correct
Installation steps¶
1. Clone ZARP¶
Clone the ZARP workflow repository with:
git clone git@github.com:zavolanlab/zarp
# or: git clone https://github.com/zavolanlab/zarp.git
2. Set up Conda environment¶
TODO: Add on...